Insertion junction: CLIP2.013700_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013700
Chromosome:chromosome 6
Location:7992874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGACTAATAGCAGCCCCACAGAAGTTTAGCGGACGCACGGCGCGCGG
Internal bar code:GGTGGAGAGCGTGAAGTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGGTCGAATGACTGGAA
Suggested primer 2:TACGCTCTTGGTGCCAACAT