Insertion junction: CLIP2.013708_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013708
Chromosome:chromosome 10
Location:1449840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428150 (1 of 1) PTHR10566:SF58 - PROTEIN D2023.6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGGAGGTGGGGATTACATTCATGGTTGATGACGAAGAAGCGGGAG
Internal bar code:TACTCGCTATCAGATACTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCTCTACTGCATGCAA
Suggested primer 2:TGCTACATGTGTGCCGTTCT