Insertion junction: CLIP2.013710_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013710
Chromosome:chromosome 13
Location:2450893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAGCTTCTGGCGCAGAGCCCGCCGCGCCGCCTCCTTGCCTGCAAGC
Internal bar code:GTCATCTCAATTGTTTTCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCGACTCCTAACCTGA
Suggested primer 2:GGCTACGCCTTCACTCATGA