Insertion junction: CLIP2.013716_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013716
Chromosome:chromosome 12
Location:9135056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543850 (1 of 1) PF09497 - Transcription mediator complex subunit Med12 (Med12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCGAAAGCCCGCGCTGTCGTCGCTAGATAACGGTGTCTGGCTGAGA
Internal bar code:TTAGTGATCATGATAGAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGATTCGCGGGAATGCT
Suggested primer 2:GTGATTCCTGTACCCAGCCC