Insertion junction: CLIP2.013718_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013718
Chromosome:chromosome 6
Location:3046681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274700 OTU4 (1 of 2) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1); OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACACCAGCACACAAATATGTCAGGAACTCGCTGCTTAATACCGGTAT
Internal bar code:TAAGCTATATTTGTTGTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2248
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGCGTGTGTTTTGCTT
Suggested primer 2:TCAAGGTGCGGGAAATCTGT