Insertion junction: CLIP2.013722_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013722
Chromosome:chromosome 6
Location:1810142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263450 EEF1A3 (1 of 3) K03231 - elongation factor 1-alpha (EEF1A); Putative eukaryotic translation initiation factor 1 alpha intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGACGGAAATGGCTGGTTGCTGATGCTGCTTTGCGCGGGGCTGCCAA
Internal bar code:TTCGTGAGACATGAGTCCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1160
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGACGACCTCAGCCATC
Suggested primer 2:AGTTCTTCACTGACCGCTGG