Insertion junction: CLIP2.013725_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013725
Chromosome:chromosome 4
Location:1345405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAAATCAATTGAAACCAGGTTGAGGGCATCACGCTGGACATCATGGCC
Internal bar code:CTAGGGACAGTAATCCAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCTACGCCTTCATCCC
Suggested primer 2:GTACACGCACACACACACAC