Insertion junction: CLIP2.013745_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013745
Chromosome:chromosome 6
Location:4973472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281400 NAH1 Cation antiporter; (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACCACACCCCACCTTGCACGATAGCGTGCGCCAGCACAGGGTCTGT
Internal bar code:ACGTTATTCATCCTGATTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCCCTCCCTGTCCCTC
Suggested primer 2:TCAACATGTGTGTGCAAGCG