Insertion junction: CLIP2.013755_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013755
Chromosome:chromosome 11
Location:4417504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g483100 (1 of 1) IPR019931 - LPXTG cell wall anchor domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCTATGTCTGGGGTAGTGGGGCCCGAGCCACTCCACCTGACTCCACC
Internal bar code:CGGTCAAGCTTGAAGGGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1610
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAAACAGTGGCAAGGAG
Suggested primer 2:ACTGTCACTGAGGAACTGCG