Insertion junction: CLIP2.013757_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013757
Chromosome:chromosome 3
Location:2317107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157950 (1 of 1) IPR011989//IPR011990//IPR016024 - Armadillo-like helical // Tetratricopeptide-like helical domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCTCGGGCCCCGCGACCCTGCTTCAACATTGCACATGACTGCACCC
Internal bar code:CTACGACCCGTACCTCTCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCCTCCGATACCACCTT
Suggested primer 2:TCCTGTGCAGCATGTGTAGG