Insertion junction: CLIP2.013759_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013759
Chromosome:chromosome 1
Location:2713277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016450 (1 of 1) IPR000104//IPR001214//IPR002893 - Antifreeze protein, type I // SET domain // Zinc finger, MYND-type; SET domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGATCAAGATCAGCCGTACAGGACCCCGCTGAGCGCCCATCGAAGCTC
Internal bar code:GCGACCACTCACCAGGATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTGTGGCTCTGTCGTA
Suggested primer 2:GCGCAATGTGGGATCATCAC