Insertion junction: CLIP2.013775_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013775
Chromosome:chromosome 1
Location:5807424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041583 (1 of 2) PF03366 - YEATS family (YEATS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGATGGCTGCTGCACACGCGGCCAGCAGGTGCACACTTGCCACGTGT
Internal bar code:ACGACTGGCCTCAGGCCACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTCCAACAGCCACCTGA
Suggested primer 2:CAAGTGCGTGTGTCTGTGTG