Insertion junction: CLIP2.013788_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013788
Chromosome:chromosome 12
Location:1227701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490150 HEL48 (1 of 1) K03654 - ATP-dependent DNA helicase RecQ (recQ); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGAGATTGCAAGGCGTGGGACAGGGCAGCGGCATGGGTGCATGGCA
Internal bar code:TTTGGATACTTTCCAGTCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTCCGCTTCACGTCTT
Suggested primer 2:GGGGTTACACGGAGTTCAGG