Insertion junction: CLIP2.013790_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013790
Chromosome:chromosome 12
Location:3100132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501000 PPT1,TPT22,TPT20 Putative UDP-GlcA transporter; (1 of 4) PTHR11132//PTHR11132:SF97 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGAGGCCGGGGAAAGAGATTGCTCGTCGTGAGCTGGGCCCTGGAC
Internal bar code:CATATCGTGGGAAATGGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAATTGGAAGGCATGGCA
Suggested primer 2:GTGGATAGGAGGGGAGGGTT