Insertion junction: CLIP2.013800_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013800
Chromosome:chromosome 12
Location:284847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801338 (1 of 2) K08592 - sentrin-specific protease 1 [EC:3.4.22.68] (SENP1) 3'UTR
Cre12.g801339 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAACACGATGTTTCAGGGATGCACATTGTGCCAGAGAGGCTGTCTGA
Internal bar code:TAGCCAAATTTGTCTCAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTTGGGATAAGGTGGTG
Suggested primer 2:GACTGCGGTGTGTTTGTGTC