Insertion junction: CLIP2.013821_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013821
Chromosome:chromosome 12
Location:6439785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537400 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCCTCCGCCGCCAGGAAAATATGTAAAACACACGCGCACACGCAAC
Internal bar code:GGTACATTTCTCGTACCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATCATTTGTCCCGGGGTGT
Suggested primer 2:TTGCTGCATTGCATACACCG