Insertion junction: CLIP2.013827_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013827
Chromosome:chromosome 16
Location:41984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g696000 (1 of 2) 2.7.7.23 - UDP-N-acetylglucosamine diphosphorylase / UDP-N-acetylglucosamine pyrophosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCAGGGTTTGCCTAAGTCACTGTGCAATGCACTCGACATCACAAAA
Internal bar code:AAGCATTTGTATATTATGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3359
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCGTTTTCTCACCACC
Suggested primer 2:CAGCCTGGCAATGAAGGGTA