Insertion junction: CLIP2.013828_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013828
Chromosome:chromosome 8
Location:3340510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377450 (1 of 1) PTHR10997:SF9 - IMPORTIN-9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGTGCGTGCAAGACGCAGCGGACAGGGTGCTCAATTTTGAAGCCTCG
Internal bar code:CCGGTTTCGTCGTGCTTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGTTGAGCGTGTGTG
Suggested primer 2:GCATACCTGTGTGTGTGGGA