Insertion junction: CLIP2.013834_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013834
Chromosome:chromosome 6
Location:3066750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275000 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCCGCGCCCCATGGGGTGGATGCGCGGCACTACACGCGCCCGCTAC
Internal bar code:TAAATTTTTTTGGTCCTAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTCGGCTTTGTGTGT
Suggested primer 2:CCACCAAGTCAAACGGCAAG