Insertion junction: CLIP2.013835_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013835
Chromosome:chromosome 6
Location:5449153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTAGAGCAGCGCGGGCGATTGCCTAGTAAGGCACCCGCACCCGGCT
Internal bar code:TTGTAACTGGGATAGATGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAGCCACAACCTGAAGT
Suggested primer 2:TTCTCCAACGTCTCCAGTGC