Insertion junction: CLIP2.013835_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013835
Chromosome:chromosome 6
Location:5449156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGCGTCTTCCTACTGACACGCTCCAGCACCCACTGTTGTGTAGCCC
Internal bar code:TTGTAACTGGGATAGATGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCAACGTCTCCAGTGC
Suggested primer 2:CCAGAGCCACAACCTGAAGT