Insertion junction: CLIP2.013836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013836
Chromosome:chromosome 9
Location:4952237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801063 (1 of 5) IPR025476//IPR027417 - Helitron helicase-like domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGAGCATGTGCGTCTGTATCACATCAACAACAACAGTGCCACAGGC
Internal bar code:ATAGCTACATGCCGTTATGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3846
LEAP-Seq percent confirming:22.1053
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGTTATGAGGCAGCCA
Suggested primer 2:TTCGCGTTCGTTCTCACTCA