Insertion junction: CLIP2.013837_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013837
Chromosome:chromosome 12
Location:8806062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546900 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGTTCACGCCCGCCAGCGCCGCCACGCCGACGTCATTCAGCGACACG
Internal bar code:GGTATTTATCGAATAGTACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGTCCGCCTGGTTGTAG
Suggested primer 2:AAAAACCCAATGCCGCATCC