Insertion junction: CLIP2.013839_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013839
Chromosome:chromosome 7
Location:5014231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCGCCAGGGAGCAGGCCAAGCCGCTCGGGGTGCCAACAAAGCGCCTG
Internal bar code:TACCGGGGCCTGGATGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTGTGCTTTTTGGAC
Suggested primer 2:AACTCATACTCGCTCCGCAG