Insertion junction: CLIP2.013855_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013855
Chromosome:chromosome 3
Location:880522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146487 XPO1 (1 of 1) K14290 - exportin-1 (XPO1, CRM1); Exportin 1 related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCTGTCGCGGGCGCGTGCCGACTCTGGGCATGTGGCAGCTCTGCAC
Internal bar code:ACCGGATGTCATAGACACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAGGAGGAGGTGTAGA
Suggested primer 2:GCTAAAGGCAGGGTCCTCTG