Insertion junction: CLIP2.013859_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013859
Chromosome:chromosome 1
Location:263942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800000 (1 of 1) PTHR13271//PTHR13271:SF9 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCATCTCATGCTCGCTCGACAGGCCGGGGCGCGCAAGCAGCGCTGTGT
Internal bar code:CAAAAAGGATGGTGTTTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGCCCCTCAGACACTAC
Suggested primer 2:GGTGTGAGCGGTGAGGTTAA