Insertion junction: CLIP2.013863_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013863
Chromosome:chromosome 5
Location:2129078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236926 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGGTCGACAAAGTATGAGGGAATTATGTCTAAGCACAAGCGCGCACA
Internal bar code:CGATGTGTCCGTTCATGGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2467
LEAP-Seq percent confirming:98.2857
LEAP-Seq n confirming:172
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:175

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACACACAAGCTCCAGGC
Suggested primer 2:ACCAGATGTTGAGGGCGAAG