Insertion junction: CLIP2.013869_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013869
Chromosome:chromosome 6
Location:1992453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265000 HTR13 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCCGCTCGCAAGACCCCCGCCACCGGCGGTGTGAAGAAGCCTCACC
Internal bar code:GGTTATAATAAAGTAGGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATCCTGTGCCGTTGCTT
Suggested primer 2:CTGCTGCTGTTTACACGCTG