Insertion junction: CLIP2.013877_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013877
Chromosome:chromosome 2
Location:2860031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800207 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCGCAAGAAGCGGCGGCGGAGATGGAGCGTGTGGCGTGGGTCTGGG
Internal bar code:GTGTTCTGTCAGGAGCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1631
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTGGAACGAGGTGACA
Suggested primer 2:TCCGATTGCTCCGTATCAGC