Insertion junction: CLIP2.013887_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013887
Chromosome:chromosome 1
Location:5011450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034800 (1 of 1) PTHR21477//PTHR21477:SF12 - FAMILY NOT NAMED // CF9 PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGTGGGTGCTTGCCAGAGAGCCGTGTTGCGTTCAGGCACCTCCCTTA
Internal bar code:AAATACAGAGTCACGTGCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTAGGTTCAGGCCAAGC
Suggested primer 2:ATTGCCCTCAGCTCCTTTCC