Insertion junction: CLIP2.013891_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013891
Chromosome:chromosome 16
Location:4401743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668400 (1 of 1) PTHR23354//PTHR23354:SF72 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // PROTEIN LMD-3, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTAGGACTCCACTCCAGATAAACGCACCCACACCAGTCTCGAGCCC
Internal bar code:TGGATGTGCGTTTTTAAAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:805
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTGACGATCGCGCACAT
Suggested primer 2:GATGGGTGGACTCTGTTGCA