Insertion junction: CLIP2.013895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013895
Chromosome:chromosome 15
Location:733969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801691 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron
lncRNA_TCONS_00216392 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGAGCTGGTGTGATGGCTGTGGCTACATGGCTCGGAACGGGGGTGTGA
Internal bar code:GTATGGTGCATTACGTGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCATCGTATCGGTCTGG
Suggested primer 2:CCTCCCCTTCCTTCCCCATA