Insertion junction: CLIP2.013899_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013899
Chromosome:chromosome 11
Location:494928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467593 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAGAACAACGTGGATGTGGAGATTAAGGACGAGGACGTGGGCAAGGA
Internal bar code:TGGCGTTATTGGTTCATCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTGCCGATAGATCCCCC
Suggested primer 2:CGCAACATCAAAACCGCAGA