Insertion junction: CLIP2.013899_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013899
Chromosome:chromosome 11
Location:494953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467593 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCACACGGGGTTGCGGCCGCCGTCCACGGCCGTGCGCGTGCGGAAGGT
Internal bar code:TGGCGTTATTGGTTCATCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAACATCAAAACCGCAGA
Suggested primer 2:CCATTGCCGATAGATCCCCC