Insertion junction: CLIP2.013901_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013901
Chromosome:chromosome 3
Location:123296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143847 (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTGACTCCTTCCTGCCATGTATCTTCAGATTGCTCCACGGCCCTTTC
Internal bar code:GCTGATCGGCCAATGCCGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1548
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTTTGCACTTGCTCTG
Suggested primer 2:CGGAGTACCACGCCACTATC