Insertion junction: CLIP2.013901_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013901
Chromosome:chromosome 3
Location:123304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143847 (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTTCGTGTGCAGGCTGGGCTGCTTTCGCACTCCTTGTCCCAAGCCG
Internal bar code:GCTGATCGGCCAATGCCGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGTACCACGCCACTATC
Suggested primer 2:CAGGCTTTGCACTTGCTCTG