Insertion junction: CLIP2.013909_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013909
Chromosome:chromosome 5
Location:634993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245100 (1 of 41) PTHR10157 - DOPAMINE BETA HYDROXYLASE RELATED intron
Cre05.g245150 (1 of 30) PF13450 - NAD(P)-binding Rossmann-like domain (NAD_binding_8) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCCTCCCGTCTGAGCGCAAACCCTAGACACGGGCTGACCCTGTCGAC
Internal bar code:TGGCGAATTGGCTTTCCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGGGCGTGATTTGTATT
Suggested primer 2:CAGCTGTTGACTGAGCAGGA