Insertion junction: CLIP2.013910_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013910
Chromosome:chromosome 17
Location:5817833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741350 KIN7-4,KIN7D Kinesin motor protein; (1 of 4) K11498 - centromeric protein E (CENPE) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCGTTGACGAGCCGAAGGAGCGGAAGACGTCCAGCACCGACTTCTCA
Internal bar code:GTTATATGGATCAGTAGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2960
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTTCCGAGCCATTCTT
Suggested primer 2:CGTTGACTCCGTTGACCAGA