Insertion junction: CLIP2.013914_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013914
Chromosome:chromosome 6
Location:2601176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00026443

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAATCCAATCTCCCAACCTCCTCCTCAACCCACGATGCCCCAACTTCA
Internal bar code:GAAACAGTTTACGTAGGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:481
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGTTCTGCATCTCAGT
Suggested primer 2:CAAGGCAGGTTGGCAAAGTC