Insertion junction: CLIP2.013916_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013916
Chromosome:chromosome 7
Location:4580035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344150 (1 of 1) PTHR21314//PTHR21314:SF0 - UNCHARACTERIZED // UPF0553 PROTEIN C9ORF64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGGAAACTCGTGGAGTCGTTAGATTGAAATCCGGCGCGTGAGTGCTA
Internal bar code:GCCTTGATTTAACAAATACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1575
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGTTGTGATGGGTCAGG
Suggested primer 2:GCGAACCTCCCTCTTTACCC