Insertion junction: CLIP2.013916_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013916
Chromosome:chromosome 7
Location:4580042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344150 (1 of 1) PTHR21314//PTHR21314:SF0 - UNCHARACTERIZED // UPF0553 PROTEIN C9ORF64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGCTCAACACGCTCCTCCGCATCCATTCCTGCAGGCGGCGCTGGAG
Internal bar code:GCCTTGATTTAACAAATACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAACCTCCCTCTTTACCC
Suggested primer 2:TTCGGTTGTGATGGGTCAGG