Insertion junction: CLIP2.013919_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013919
Chromosome:chromosome 17
Location:1529073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCCTGGGGCGCGTTGTCGGGGTCGGGTGGCTGAGTGAGGGCGATGG
Internal bar code:TGAATATGAACGTCGTAAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTGTCTCCTCCGCCTC
Suggested primer 2:GCCCTGTGATGTCGATTTGC