Insertion junction: CLIP2.013923_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013923
Chromosome:chromosome 17
Location:748110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701100 CPK8 (1 of 1) 2.7.1.83 - Pseudouridine kinase; putative carbohydrate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTCCCCCGCATTGGGCGACACGAACGTGGCGTACGGCAGCGAGCGAG
Internal bar code:TCAGTGCGAAAAACATCCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGACTGAAAAACGTCGC
Suggested primer 2:TTACCGCCACTGACACTGAC