Insertion junction: CLIP2.013924_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013924
Chromosome:chromosome 1
Location:1949636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010800 (1 of 3) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAGCTTGTCTGCTGCACGCCGCCTCTCTTGTCGCCGTTGCCATTCAC
Internal bar code:TCTGAAGCGGATTTGCTGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCCACAAGACAAAACG
Suggested primer 2:GACTGACTGACTGACTGGGC