Insertion junction: CLIP2.013930_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013930
Chromosome:chromosome 6
Location:8204596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTTGTGTGCCGGTGCCGGTGCGGGCGCAGGCGCGGGGGGCGCGACTG
Internal bar code:GTGTCGTTGGTCGCGGGCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1518
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCTGCCTGTGACCTCGA
Suggested primer 2:CGTGTGTGGGAGCAAAAGTG