Insertion junction: CLIP2.013932_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013932
Chromosome:chromosome 16
Location:1829607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGGGGTAGTCGCAACCCGGGGGCGTGAAGGCAGCGGGTGGGCCGGTC
Internal bar code:GTTAGTCGGCCCCGAGATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1837
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGCAGCAAACAACACAT
Suggested primer 2:GGGGACTCAGTGCTCATACG