Insertion junction: CLIP2.013932_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013932
Chromosome:chromosome 16
Location:1829616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCACCTGCCACTGGCTGCAGGCCTCACTGGGGCTGTCGCGCACCACGC
Internal bar code:GTTAGTCGGCCCCGAGATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3309
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGACTCAGTGCTCATACG
Suggested primer 2:GGACGCAGCAAACAACACAT