Insertion junction: CLIP2.013936_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013936
Chromosome:chromosome 1
Location:1370189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007150 (1 of 1) PTHR12864:SF14 - RAN-BINDING PROTEINS 9/10 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGCGCGCCGGGAAGAGGAGGGTGGTCGGGGGTCATCATGCCCGCGG
Internal bar code:GTTAACGCTATTTGTAGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCATGATCACAGTGGT
Suggested primer 2:AATGTGCTCACCTGGGGAAG