Insertion junction: CLIP2.013939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013939
Chromosome:chromosome 17
Location:5603859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739850 LRRC6,Seahorse,DNAAF11,MOT47 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Leucine-rich repeat-containing protein 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACTCCAGGAAAAGGCGAACCGGGAAGCCGACGAGAAGAAGAAAGCCG
Internal bar code:AGTGTTATGAAGGTGCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:528
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGGATTGGGGGTTGGGG
Suggested primer 2:ATCCTAGAGCACAGGGAGCA