Insertion junction: CLIP2.013945_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013945
Chromosome:chromosome 17
Location:4809577
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g733400 (1 of 4) PF13515 - Fusaric acid resistance protein-like (FUSC_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGGGAAGCTTGGTGGGGAGTGGTCTGGGCGTCCTGATGGCTGGCGTT
Internal bar code:GTGTCATGTTACTTTACTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATGTAGCCGAACATGG
Suggested primer 2:TGTGGTGTGGAGGTATGTGC